Phage Utilities (phu): modular toolkit for clustering, classifying, and analyzing viral sequences.
phu (Phage Utilities) is a Python toolkit designed for viral bioinformatics workflows.
It provides modular commands to handle tasks such as:
* seqclust: dereplication and clustering of viral contigs into vOTUs and putative species-level groups.
* taxasimplify: simplification and parsing of viral taxonomy assignments.
