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pastml

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Ancestral character reconstruction and visualisation for rooted phylogenetic trees.

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::pastml

Usage Tracking

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Downloads (Last 6 months): 0

Description

PastML provides fast methods for Ancestral Character Reconstruction (ACR) and visualisation on rooted phylogenetic trees. Given a rooted tree and its node annotations, it can either visualise them as-is, or infer ancestral node states based on the tip states, with a selection of maximum likelihood and parsimonious methods. The result is then visualised as a zoomable html map.

About

Summary

Ancestral character reconstruction and visualisation for rooted phylogenetic trees.

Last Updated

Apr 29, 2025 at 22:27

License

GPL-3.0-or-later

Total Downloads

11.8K

Supported Platforms

noarch