Megadepth is an efficient tool for extracting coverage related information from RNA and DNA-seq BAM and BigWig files. It supports reading whole-genome coverage from BAM files and writing either indexed TSV or BigWig files, as well as efficient region coverage summary over intervals from both types of files.
https://anaconda.org/bioconda/megadepth/badges/version.svg
https://anaconda.org/bioconda/megadepth/badges/latest_release_date.svg
https://anaconda.org/bioconda/megadepth/badges/latest_release_relative_date.svg
https://anaconda.org/bioconda/megadepth/badges/platforms.svg
https://anaconda.org/bioconda/megadepth/badges/license.svg
https://anaconda.org/bioconda/megadepth/badges/downloads.svg