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m-party

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Mining Protein dAtasets foR Targeted EnzYmes

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::m-party

Usage Tracking

0.2.2
1 / 8 versions selected
Downloads (Last 6 months): 0

Description

M-PARTY takes an input FASTA file with a variable number of aminoacidic sequences and performes a search against an considerable amount of Hidden Markov Models, previously built and trained from state of the art plastic (PE - polyethylene) degrading enzymes. This process relies on the hmmsearch function from HMMER to perform the structural annotation. Output deduces about the potential presence of plastic degradring enzymes in the inputed sequences, and is composed by 3 distinct files, in order to help the user to have an easier time to read and conclude about the results.

About

Summary

Mining Protein dAtasets foR Targeted EnzYmes

Last Updated

Nov 16, 2022 at 09:56

License

MIT license

Total Downloads

2.0K

Supported Platforms

noarch