bioconda / packages / homoeditdistance 0.0.1

An implementation of the homo-edit distance algorithm.


conda install

  • noarch  v0.0.1
To install this package with conda run:
conda install -c bioconda homoeditdistance


A homo-insertion is an insertion of a string of equal characters, which we also call a block, into another string. A homo-deletion is the inverse operation, that is, the deletion of such a block. We consider the following problem: Given two strings, what is the minimum number of homo-insertions or homo-deletions needed to convert one into the other? We refer to this number as the homo-edit distance.

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