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bioconda / packages / hmftools-sage

SAGE is a somatic SNV, MNV and small INDEL caller optimised 100x tumor / 40x normal coverage, but has a flexible set of filters that can be adapted to lower or higher depth coverage.

Filters
Type Size Name Uploaded Downloads Labels
conda 15.4 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_4.tar.bz2  1 month and 14 days ago 121 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_3.tar.bz2  2 months and 4 days ago 71 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_2.tar.bz2  2 months and 10 days ago 46 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_1.tar.bz2  2 months and 30 days ago 62 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_0.tar.bz2  3 months and 4 days ago 40 main
conda 15.4 MB | noarch/hmftools-sage-3.4.4-hdfd78af_0.tar.bz2  6 months and 28 days ago 217 main
conda 15.4 MB | noarch/hmftools-sage-3.4.3-hdfd78af_0.tar.bz2  7 months and 29 days ago 253 main
conda 15.4 MB | noarch/hmftools-sage-3.4.2-hdfd78af_0.tar.bz2  10 months and 2 days ago 313 main
conda 15.4 MB | noarch/hmftools-sage-3.4.1-hdfd78af_0.tar.bz2  10 months and 13 days ago 325 main
conda 15.4 MB | noarch/hmftools-sage-3.4-hdfd78af_1.tar.bz2  10 months and 27 days ago 680 main
conda 15.4 MB | noarch/hmftools-sage-3.4-hdfd78af_0.tar.bz2  11 months and 1 day ago 57 main
conda 14.8 MB | noarch/hmftools-sage-3.2.3-hdfd78af_0.tar.bz2  1 year and 10 months ago 1413 main
conda 15.1 MB | noarch/hmftools-sage-3.1-hdfd78af_0.tar.bz2  2 years and 5 months ago 1770 main
conda 15.0 MB | noarch/hmftools-sage-3.0.3-hdfd78af_0.tar.bz2  2 years and 6 months ago 1818 main
conda 15.0 MB | noarch/hmftools-sage-3.0.2-hdfd78af_0.tar.bz2  2 years and 7 months ago 1833 main
conda 20.1 MB | noarch/hmftools-sage-3.0.1-hdfd78af_0.tar.bz2  2 years and 8 months ago 1918 main
conda 21.2 MB | noarch/hmftools-sage-2.8-hdfd78af_1.tar.bz2  2 years and 10 months ago 2086 main
conda 21.2 MB | noarch/hmftools-sage-2.8-hdfd78af_0.tar.bz2  3 years and 8 months ago 674 main
conda 21.2 MB | noarch/hmftools-sage-2.7-hdfd78af_1.tar.bz2  3 years and 9 months ago 2449 main
conda 21.2 MB | noarch/hmftools-sage-2.7-0.tar.bz2  3 years and 9 months ago 183 main
conda 21.2 MB | noarch/hmftools-sage-2.6-0.tar.bz2  3 years and 11 months ago 2489 main
conda 21.2 MB | noarch/hmftools-sage-2.5-0.tar.bz2  4 years and 23 days ago 2453 main
conda 21.0 MB | noarch/hmftools-sage-2.4-0.tar.bz2  4 years and 2 months ago 2461 main
conda 21.0 MB | noarch/hmftools-sage-2.3-0.tar.bz2  4 years and 3 months ago 2464 main
conda 19.3 MB | noarch/hmftools-sage-2.2-2.tar.bz2  4 years and 4 months ago 2459 main
conda 19.3 MB | noarch/hmftools-sage-2.2-1.tar.bz2  4 years and 4 months ago 205 main
conda 19.3 MB | noarch/hmftools-sage-2.2-0.tar.bz2  4 years and 5 months ago 213 main
conda 17.9 MB | noarch/hmftools-sage-1.0-0.tar.bz2  5 years and 9 months ago 2882 main
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