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bioconda / packages / hmftools-sage

SAGE is a somatic SNV, MNV and small INDEL caller optimised 100x tumor / 40x normal coverage, but has a flexible set of filters that can be adapted to lower or higher depth coverage.

Filters
Type Size Name Uploaded Downloads Labels
conda 15.4 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_4.tar.bz2  1 month and 6 days ago 104 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_3.tar.bz2  1 month and 27 days ago 70 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_2.tar.bz2  2 months and 2 days ago 45 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_1.tar.bz2  2 months and 22 days ago 61 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_0.tar.bz2  2 months and 27 days ago 39 main
conda 15.4 MB | noarch/hmftools-sage-3.4.4-hdfd78af_0.tar.bz2  6 months and 19 days ago 213 main
conda 15.4 MB | noarch/hmftools-sage-3.4.3-hdfd78af_0.tar.bz2  7 months and 21 days ago 249 main
conda 15.4 MB | noarch/hmftools-sage-3.4.2-hdfd78af_0.tar.bz2  9 months and 25 days ago 309 main
conda 15.4 MB | noarch/hmftools-sage-3.4.1-hdfd78af_0.tar.bz2  10 months and 5 days ago 321 main
conda 15.4 MB | noarch/hmftools-sage-3.4-hdfd78af_1.tar.bz2  10 months and 19 days ago 663 main
conda 15.4 MB | noarch/hmftools-sage-3.4-hdfd78af_0.tar.bz2  10 months and 24 days ago 56 main
conda 14.8 MB | noarch/hmftools-sage-3.2.3-hdfd78af_0.tar.bz2  1 year and 10 months ago 1400 main
conda 15.1 MB | noarch/hmftools-sage-3.1-hdfd78af_0.tar.bz2  2 years and 5 months ago 1753 main
conda 15.0 MB | noarch/hmftools-sage-3.0.3-hdfd78af_0.tar.bz2  2 years and 6 months ago 1805 main
conda 15.0 MB | noarch/hmftools-sage-3.0.2-hdfd78af_0.tar.bz2  2 years and 6 months ago 1820 main
conda 20.1 MB | noarch/hmftools-sage-3.0.1-hdfd78af_0.tar.bz2  2 years and 8 months ago 1905 main
conda 21.2 MB | noarch/hmftools-sage-2.8-hdfd78af_1.tar.bz2  2 years and 9 months ago 2069 main
conda 21.2 MB | noarch/hmftools-sage-2.8-hdfd78af_0.tar.bz2  3 years and 8 months ago 673 main
conda 21.2 MB | noarch/hmftools-sage-2.7-hdfd78af_1.tar.bz2  3 years and 9 months ago 2432 main
conda 21.2 MB | noarch/hmftools-sage-2.7-0.tar.bz2  3 years and 9 months ago 182 main
conda 21.2 MB | noarch/hmftools-sage-2.6-0.tar.bz2  3 years and 11 months ago 2472 main
conda 21.2 MB | noarch/hmftools-sage-2.5-0.tar.bz2  4 years and 15 days ago 2436 main
conda 21.0 MB | noarch/hmftools-sage-2.4-0.tar.bz2  4 years and 2 months ago 2444 main
conda 21.0 MB | noarch/hmftools-sage-2.3-0.tar.bz2  4 years and 3 months ago 2447 main
conda 19.3 MB | noarch/hmftools-sage-2.2-2.tar.bz2  4 years and 3 months ago 2442 main
conda 19.3 MB | noarch/hmftools-sage-2.2-1.tar.bz2  4 years and 3 months ago 204 main
conda 19.3 MB | noarch/hmftools-sage-2.2-0.tar.bz2  4 years and 5 months ago 212 main
conda 17.9 MB | noarch/hmftools-sage-1.0-0.tar.bz2  5 years and 8 months ago 2865 main
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