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bioconda / packages / hmftools-sage

SAGE is a somatic SNV, MNV and small INDEL caller optimised 100x tumor / 40x normal coverage, but has a flexible set of filters that can be adapted to lower or higher depth coverage.

Filters
Type Size Name Uploaded Downloads Labels
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_3.tar.bz2  6 days and 4 hours ago 28 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_2.tar.bz2  12 days and 7 hours ago 37 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_1.tar.bz2  1 month and 1 day ago 53 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_0.tar.bz2  1 month and 5 days ago 32 main
conda 15.4 MB | noarch/hmftools-sage-3.4.4-hdfd78af_0.tar.bz2  4 months and 29 days ago 170 main
conda 15.4 MB | noarch/hmftools-sage-3.4.3-hdfd78af_0.tar.bz2  6 months and 8 hours ago 206 main
conda 15.4 MB | noarch/hmftools-sage-3.4.2-hdfd78af_0.tar.bz2  8 months and 4 days ago 268 main
conda 15.4 MB | noarch/hmftools-sage-3.4.1-hdfd78af_0.tar.bz2  8 months and 14 days ago 281 main
conda 15.4 MB | noarch/hmftools-sage-3.4-hdfd78af_1.tar.bz2  8 months and 29 days ago 552 main
conda 15.4 MB | noarch/hmftools-sage-3.4-hdfd78af_0.tar.bz2  9 months and 3 days ago 47 main
conda 14.8 MB | noarch/hmftools-sage-3.2.3-hdfd78af_0.tar.bz2  1 year and 8 months ago 1294 main
conda 15.1 MB | noarch/hmftools-sage-3.1-hdfd78af_0.tar.bz2  2 years and 3 months ago 1642 main
conda 15.0 MB | noarch/hmftools-sage-3.0.3-hdfd78af_0.tar.bz2  2 years and 5 months ago 1699 main
conda 15.0 MB | noarch/hmftools-sage-3.0.2-hdfd78af_0.tar.bz2  2 years and 5 months ago 1715 main
conda 20.1 MB | noarch/hmftools-sage-3.0.1-hdfd78af_0.tar.bz2  2 years and 6 months ago 1800 main
conda 21.2 MB | noarch/hmftools-sage-2.8-hdfd78af_1.tar.bz2  2 years and 8 months ago 1958 main
conda 21.2 MB | noarch/hmftools-sage-2.8-hdfd78af_0.tar.bz2  3 years and 6 months ago 664 main
conda 21.2 MB | noarch/hmftools-sage-2.7-hdfd78af_1.tar.bz2  3 years and 7 months ago 2321 main
conda 21.2 MB | noarch/hmftools-sage-2.7-0.tar.bz2  3 years and 7 months ago 174 main
conda 21.2 MB | noarch/hmftools-sage-2.6-0.tar.bz2  3 years and 9 months ago 2361 main
conda 21.2 MB | noarch/hmftools-sage-2.5-0.tar.bz2  3 years and 10 months ago 2326 main
conda 21.0 MB | noarch/hmftools-sage-2.4-0.tar.bz2  4 years and 17 days ago 2334 main
conda 21.0 MB | noarch/hmftools-sage-2.3-0.tar.bz2  4 years and 1 month ago 2338 main
conda 19.3 MB | noarch/hmftools-sage-2.2-2.tar.bz2  4 years and 2 months ago 2332 main
conda 19.3 MB | noarch/hmftools-sage-2.2-1.tar.bz2  4 years and 2 months ago 197 main
conda 19.3 MB | noarch/hmftools-sage-2.2-0.tar.bz2  4 years and 3 months ago 206 main
conda 17.9 MB | noarch/hmftools-sage-1.0-0.tar.bz2  5 years and 7 months ago 2755 main
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