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bioconda / packages / hmftools-sage

SAGE is a somatic SNV, MNV and small INDEL caller optimised 100x tumor / 40x normal coverage, but has a flexible set of filters that can be adapted to lower or higher depth coverage.

Filters
Type Size Name Uploaded Downloads Labels
conda 15.4 MB | noarch/hmftools-sage-4.2-hdfd78af_1.conda  10 days and 5 hours ago 20 main
conda 15.4 MB | noarch/hmftools-sage-4.2-hdfd78af_0.conda  3 months and 23 days ago 98 main
conda 15.6 MB | noarch/hmftools-sage-4.1-hdfd78af_0.tar.bz2  7 months and 21 days ago 273 main
conda 15.9 MB | noarch/hmftools-sage-4.0-hdfd78af_0.tar.bz2  1 year and 24 days ago 438 main
conda 15.4 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_4.tar.bz2  1 year and 3 months ago 547 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_3.tar.bz2  1 year and 4 months ago 163 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_2.tar.bz2  1 year and 4 months ago 139 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_1.tar.bz2  1 year and 5 months ago 157 main
conda 15.5 MB | noarch/hmftools-sage-4.0_beta-hdfd78af_0.tar.bz2  1 year and 5 months ago 130 main
conda 15.4 MB | noarch/hmftools-sage-3.4.4-hdfd78af_0.tar.bz2  1 year and 9 months ago 335 main
conda 15.4 MB | noarch/hmftools-sage-3.4.3-hdfd78af_0.tar.bz2  1 year and 10 months ago 360 main
conda 15.4 MB | noarch/hmftools-sage-3.4.2-hdfd78af_0.tar.bz2  2 years and 8 days ago 417 main
conda 15.4 MB | noarch/hmftools-sage-3.4.1-hdfd78af_0.tar.bz2  2 years and 15 days ago 428 main
conda 15.4 MB | noarch/hmftools-sage-3.4-hdfd78af_1.tar.bz2  2 years and 1 month ago 1064 main
conda 15.4 MB | noarch/hmftools-sage-3.4-hdfd78af_0.tar.bz2  2 years and 1 month ago 144 main
conda 14.8 MB | noarch/hmftools-sage-3.2.3-hdfd78af_0.tar.bz2  3 years and 23 days ago 1627 main
conda 15.1 MB | noarch/hmftools-sage-3.1-hdfd78af_0.tar.bz2  3 years and 7 months ago 2155 main
conda 15.0 MB | noarch/hmftools-sage-3.0.3-hdfd78af_0.tar.bz2  3 years and 9 months ago 2033 main
conda 15.0 MB | noarch/hmftools-sage-3.0.2-hdfd78af_0.tar.bz2  3 years and 9 months ago 2043 main
conda 20.1 MB | noarch/hmftools-sage-3.0.1-hdfd78af_0.tar.bz2  3 years and 10 months ago 2135 main
conda 21.2 MB | noarch/hmftools-sage-2.8-hdfd78af_1.tar.bz2  4 years and 11 days ago 2458 main
conda 21.2 MB | noarch/hmftools-sage-2.8-hdfd78af_0.tar.bz2  4 years and 10 months ago 760 main
conda 21.2 MB | noarch/hmftools-sage-2.7-hdfd78af_1.tar.bz2  4 years and 11 months ago 2823 main
conda 21.2 MB | noarch/hmftools-sage-2.7-0.tar.bz2  4 years and 11 months ago 266 main
conda 21.2 MB | noarch/hmftools-sage-2.6-0.tar.bz2  5 years and 2 months ago 2862 main
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