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gopeaks

Community

Peak caller for CUT&TAG data

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::gopeaks

Usage Tracking

1.0.0
1 / 8 versions selected
Downloads (Last 6 months): 0

Description

GoPeaks is a peak caller designed for CUT&TAG/CUT&RUN sequencing data. GoPeaks by default works best with narrow peaks such as H3K4me3 and transcription factors. However, broad epigenetic marks like H3K27Ac/H3K4me1 require different the step, slide, and minwidth parameters. We encourage users to explore the parameters of GoPeaks to analyze their data.

About

Summary

Peak caller for CUT&TAG data

Last Updated

May 8, 2022 at 17:20

License

MIT

Total Downloads

3.4K

Supported Platforms

linux-64
macOS-64