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High-performance SRA-to-SAM/BAM/FASTQ converter.

Installers

  • linux-aarch64 v0.1.0
  • linux-64 v0.1.0
  • osx-64 v0.1.0
  • osx-arm64 v0.1.0

conda install

To install this package run one of the following:
conda install bioconda::fg-sra

Description

fg-sra is a high-performance replacement for NCBI's sam-dump that converts SRA data to SAM, BAM, FASTA, and FASTQ formats. It provides multi-threaded processing, genomic region filtering, quality score quantization, and reference caching.


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