egap
EGAP pipeline for genome assembly and QC analysis
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Description
EGAP (Entheome Genome Assembly Pipeline) is a versatile bioinformatics pipeline for hybrid genome assembly from Oxford Nanopore, Illumina, and PacBio data. It supports multiple input modes and assembly methods and determines the best based on multiple metrics: BUSCO Completeness (Single + Duplicated), Assembly Contig Count, Assembly N50, Assembly L50, and Assembly GC-content.
About
Summary
EGAP pipeline for genome assembly and QC analysis
Last Updated
Dec 20, 2025 at 19:58
License
BSD-3-Clause
Total Downloads
2.5K
Supported Platforms
noarch