This tool is made to remove "tips" (short dead ends) from a compacted de Bruijn graph and more generally to remove sequencing errors. Used in Bcool a short read corrector (https://arxiv.org/abs/1711.03336)

Installers

Info: This package contains files in non-standard labels.
  • linux-64 v1.0.1

conda install

To install this package run one of the following:
conda install -c bioconda btrim
conda install -c "bioconda/label/cf201901" btrim

Description


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