bioconda / packages / biopet-extractadaptersfastqc 0.2

ExtractAdaptersFastqc reads which adapter sequences where found from a FastQC raw report.

Installers

Info: This package contains files in non-standard labels.

conda install

  • linux-64  v0.2
  • osx-64  v0.2
To install this package with conda run one of the following:
conda install -c bioconda biopet-extractadaptersfastqc
conda install -c bioconda/label/cf201901 biopet-extractadaptersfastqc

Description

ExtractAdaptersFastqc reads which adapter sequences where found from a FastQC raw report. These sequences can be used as input for a QC tool such as cutadapt. The sequences can be output in plain text format with a newline character as a separator between the sequences. Alternatively the sequences can be output in FASTA format.

For documentation and manuals visit our github.io page: https://biopet.github.io/extractadaptersfastqc

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