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bioconductor-tidysbml

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Extract SBML's data into dataframes

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-tidysbml

Usage Tracking

1.0.0
1 / 8 versions selected
Downloads (Last 6 months): 0

Description

Starting from one SBML file, it extracts information from each listOfCompartments, listOfSpecies and listOfReactions element by saving them into data frames. Each table provides one row for each entity (i.e. either compartment, species, reaction or speciesReference) and one set of columns for the attributes, one column for the content of the 'notes' subelement and one set of columns for the content of the 'annotation' subelement.

About

Summary

Extract SBML's data into dataframes

Last Updated

Dec 14, 2024 at 18:53

License

CC BY 4.0

Total Downloads

418

Supported Platforms

noarch