bioconda / packages / bioconductor-tdaracne 1.38.0

Network reverse engineering from time course data.

Installers

Info: This package contains files in non-standard labels.

conda install

  • linux-64  v1.30.0
  • osx-64  v1.28.0
  • noarch  v1.38.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-tdaracne
conda install -c bioconda/label/gcc7 bioconductor-tdaracne
conda install -c bioconda/label/cf201901 bioconductor-tdaracne

Description

To infer gene networks from time-series measurements is a current challenge into bioinformatics research area. In order to detect dependencies between genes at different time delays, we propose an approach to infer gene regulatory networks from time-series measurements starting from a well known algorithm based on information theory. The proposed algorithm is expected to be useful in reconstruction of small biological directed networks from time course data.

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