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bioconductor-targetscoredata

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TargetScoreData

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-targetscoredata

Usage Tracking

1.42.0
1.38.0
1.36.0
1.33.0
1.30.0
5 / 8 versions selected
Total downloads: 0

Description

Precompiled and processed miRNA-overexpression fold-changes from 84 Gene Expression Omnibus (GEO) series corresponding to 6 platforms, 77 human cells or tissues, and 113 distinct miRNAs. Accompanied with the data, we also included in this package the sequence feature scores from TargetScanHuman 6.1 including the context+ score and the probabilities of conserved targeting for each miRNA-mRNA interaction. Thus, the user can use these static sequence-based scores together with user-supplied tissue/cell-specific fold-change due to miRNA overexpression to predict miRNA targets using the package TargetScore (download separately)

About

Summary

TargetScoreData

Information Last Updated

Apr 22, 2025 at 15:29

License

GPL-2

Total Downloads

24.4K

Platforms

noarch Version: 1.42.0