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bioconductor-synergyfinder

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Calculate and Visualize Synergy Scores for Drug Combinations

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-synergyfinder

Usage Tracking

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Description

Efficient implementations for analyzing pre-clinical multiple drug combination datasets. It provides efficient implementations for 1.the popular synergy scoring models, including HSA, Loewe, Bliss, and ZIP to quantify the degree of drug combination synergy; 2. higher order drug combination data analysis and synergy landscape visualization for unlimited number of drugs in a combination; 3. statistical analysis of drug combination synergy and sensitivity with confidence intervals and p-values; 4. synergy barometer for harmonizing multiple synergy scoring methods to provide a consensus metric of synergy; 5. evaluation of synergy and sensitivity simultaneously to provide an unbiased interpretation of the clinical potential of the drug combinations. Based on this package, we also provide a web application (http://www.synergyfinder.org) for users who prefer graphical user interface.

About

Summary

Calculate and Visualize Synergy Scores for Drug Combinations

Last Updated

Dec 14, 2024 at 14:49

License

Mozilla Public License 2.0

Total Downloads

53.4K

Supported Platforms

noarch

Unsupported Platforms

linux-64 Last supported version: 2.4.0
macOS-64 Last supported version: 2.4.0