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bioconductor-standr

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Spatial transcriptome analyses of Nanostring's DSP data in R

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-standr

Usage Tracking

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Downloads (Last 6 months): 0

Description

standR is an user-friendly R package providing functions to assist conducting good-practice analysis of Nanostring's GeoMX DSP data. All functions in the package are built based on the SpatialExperiment object, allowing integration into various spatial transcriptomics-related packages from Bioconductor. standR allows data inspection, quality control, normalization, batch correction and evaluation with informative visualizations.

About

Summary

Spatial transcriptome analyses of Nanostring's DSP data in R

Last Updated

Jan 1, 2025 at 08:12

License

MIT + file LICENSE

Total Downloads

4.6K

Supported Platforms

noarch