bioconda / packages / bioconductor-sspaths 1.2.0

ssPATHS: Single Sample PATHway Score

Installers

conda install

  • noarch  v1.2.0
To install this package with conda run:
conda install -c bioconda bioconductor-sspaths

Description

This package generates pathway scores from expression data for single samples after training on a reference cohort. The score is generated by taking the expression of a gene set (pathway) from a reference cohort and performing linear discriminant analysis to distinguish samples in the cohort that have the pathway augmented and not. The separating hyperplane is then used to score new samples.

PRIVACY POLICY  |  EULA (Anaconda Cloud v2.33.29) © 2020 Anaconda, Inc. All Rights Reserved.