bioconda / packages / bioconductor-srgnet 1.14.0

SRGnet: An R package for studying synergistic response to gene mutations from transcriptomics data

Installers

Info: This package contains files in non-standard labels.

conda install

  • noarch  v1.14.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-srgnet
conda install -c bioconda/label/gcc7 bioconductor-srgnet

Description

We developed SRGnet to analyze synergistic regulatory mechanisms in transcriptome profiles that act to enhance the overall cell response to combination of mutations, drugs or environmental exposure. This package can be used to identify regulatory modules downstream of synergistic response genes, prioritize synergistic regulatory genes that may be potential intervention targets, and contextualize gene perturbation experiments.

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