bioconductor-spiky
Spike-in calibration for cell-free MeDIP
Spike-in calibration for cell-free MeDIP
To install this package, run one of the following:
spiky implements methods and model generation for cfMeDIP (cell-free methylated DNA immunoprecipitation) with spike-in controls. CfMeDIP is an enrichment protocol which avoids destructive conversion of scarce template, making it ideal as a "liquid biopsy," but creating certain challenges in comparing results across specimens, subjects, and experiments. The use of synthetic spike-in standard oligos allows diagnostics performed with cfMeDIP to quantitatively compare samples across subjects, experiments, and time points in both relative and absolute terms.
Summary
Spike-in calibration for cell-free MeDIP
Last Updated
Dec 30, 2024 at 02:38
License
GPL-2
Total Downloads
7.5K
Supported Platforms