bioconda / packages / bioconductor-spia 2.40.0

Signaling Pathway Impact Analysis (SPIA) using combined evidence of pathway over-representation and unusual signaling perturbations

Installers

Info: This package contains files in non-standard labels.

conda install

  • linux-64  v2.32.0
  • osx-64  v2.30.0
  • noarch  v2.40.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-spia
conda install -c bioconda/label/gcc7 bioconductor-spia
conda install -c bioconda/label/cf201901 bioconductor-spia

Description

This package implements the Signaling Pathway Impact Analysis (SPIA) which uses the information form a list of differentially expressed genes and their log fold changes together with signaling pathways topology, in order to identify the pathways most relevant to the condition under the study.

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