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bioconda / packages / bioconductor-spatialfda 1.2.0

A Tool for Spatial Multi-sample Comparisons

Installers

  • noarch v1.2.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-spatialfda

Description

spatialFDA is a package to calculate spatial statistics metrics. The package takes a SpatialExperiment object and calculates spatial statistics metrics using the package spatstat. Then it compares the resulting functions across samples/conditions using functional additive models as implemented in the package refund. Furthermore, it provides exploratory visualisations using functional principal component analysis, as well implemented in refund.


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