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bioconda / packages / bioconductor-spatialexperimentio 1.2.0

Read in Xenium, CosMx, MERSCOPE or STARmapPLUS data as SpatialExperiment object

Installers

  • noarch v1.2.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-spatialexperimentio

Description

Read in imaging-based spatial transcriptomics technology data. Current available modules are for Xenium by 10X Genomics, CosMx by Nanostring, MERSCOPE by Vizgen, or STARmapPLUS from Broad Institute. You can choose to read the data in as a SpatialExperiment or a SingleCellExperiment object.


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