bioconductor-spanorm
Spatially-aware normalisation for spatial transcriptomics data
Spatially-aware normalisation for spatial transcriptomics data
To install this package, run one of the following:
This package implements the spatially aware library size normalisation algorithm, SpaNorm. SpaNorm normalises out library size effects while retaining biology through the modelling of smooth functions for each effect. Normalisation is performed in a gene- and cell-/spot- specific manner, yielding library size adjusted data.
Summary
Spatially-aware normalisation for spatial transcriptomics data
Last Updated
Dec 23, 2024 at 12:06
License
GPL (>= 3)
Total Downloads
334
Supported Platforms