bioconductor-spanorm
Spatially-aware normalisation for spatial transcriptomics data
Spatially-aware normalisation for spatial transcriptomics data
To install this package, run one of the following:
This package implements the spatially aware library size normalisation algorithm, SpaNorm. SpaNorm normalises out library size effects while retaining biology through the modelling of smooth functions for each effect. Normalisation is performed in a gene- and cell-/spot- specific manner, yielding library size adjusted data.
Summary
Spatially-aware normalisation for spatial transcriptomics data
Information Last Updated
Apr 22, 2025 at 15:29
License
GPL (>= 3)
Total Downloads
318
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