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bioconda / packages / bioconductor-smoppix 1.2.1

Analyze Single Molecule Spatial Omics Data Using the Probabilistic Index

Installers

  • osx-64 v1.2.1
  • linux-64 v1.2.1

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-smoppix

Description

Test for univariate and bivariate spatial patterns in spatial omics data with single-molecule resolution. The tests implemented allow for analysis of nested designs and are automatically calibrated to different biological specimens. Tests for aggregation, colocalization, gradients and vicinity to cell edge or centroid are provided.


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