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bioconda / packages / bioconductor-smokingmouse 1.4.0

Provides access to smokingMouse project data

Installers

  • noarch v1.4.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-smokingmouse

Description

This is an ExperimentHub package that provides access to the data at the gene, exon, transcript and junction level used in the analyses of the smokingMouse project. See https://github.com/LieberInstitute/smokingMouse_Indirects. This datasets contain the expression counts of genes, transcripts, exons and exon-exon junctions across 208 mice samples from pup and adult brains and adult blood. They also contain relevant information of these samples and features, such as conditions, QC metrics and if they were used after filtering steps and also if the features were differently expressed in the different experiments.


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