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bioconductor-sigspack

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Mutational Signature Estimation for Single Samples

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-sigspack

Usage Tracking

1.20.0
1.16.0
1.14.0
1.12.0
1.8.0
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Total downloads: 0

Description

Single sample estimation of exposure to mutational signatures. Exposures to known mutational signatures are estimated for single samples, based on quadratic programming algorithms. Bootstrapping the input mutational catalogues provides estimations on the stability of these exposures. The effect of the sequence composition of mutational context can be taken into account by normalising the catalogues.

About

Summary

Mutational Signature Estimation for Single Samples

Information Last Updated

Apr 22, 2025 at 15:29

License

GPL-3

Total Downloads

18.1K

Platforms

noarch Version: 1.20.0