bioconda / packages / bioconductor-shinymethyldata 1.8.0

Example dataset of input data for shinyMethyl

Installers

Info: This package contains files in non-standard labels.

conda install

  • noarch  v1.8.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-shinymethyldata
conda install -c bioconda/label/gcc7 bioconductor-shinymethyldata

Description

Extracted data from 369 TCGA Head and Neck Cancer DNA methylation samples. The extracted data serve as an example dataset for the package shinyMethyl. Original samples are from 450k methylation arrays, and were obtained from The Cancer Genome Atlas (TCGA). 310 samples are from tumor, 50 are matched normals and 9 are technical replicates of a control cell line.

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