CMD + K

bioconductor-scvir

Community

experimental inferface from R to scvi-tools

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-scvir

Usage Tracking

1.6.0
1.2.0
1.0.0
3 / 8 versions selected
Downloads (Last 6 months): 0

Description

This package defines interfaces from R to scvi-tools. A vignette works through the totalVI tutorial for analyzing CITE-seq data. Another vignette compares outputs of Chapter 12 of the OSCA book with analogous outputs based on totalVI quantifications. Future work will address other components of scvi-tools, with a focus on building understanding of probabilistic methods based on variational autoencoders.

About

Summary

experimental inferface from R to scvi-tools

Last Updated

Dec 23, 2024 at 05:41

License

Artistic-2.0

Total Downloads

3.0K

Supported Platforms

noarch