R/Bioconductor package to interactively explore and visualize single cell RNA-seq datasets with hierarhical annotations
scTreeViz provides classes to support interactive data aggregation and visualization of single cell RNA-seq datasets with hierarchies for e.g. cell clusters at different resolutions. The TreeIndex class provides methods to manage hierarchy and split the tree at a given resolution or across resolutions. The TreeViz class extends SummarizedExperiment and can performs quick aggregations on the count matrix defined by clusters.
