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bioconductor-scdd

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Mixture modeling of single-cell RNA-seq data to identify genes with differential distributions

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-scdd

Usage Tracking

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Description

This package implements a method to analyze single-cell RNA- seq Data utilizing flexible Dirichlet Process mixture models. Genes with differential distributions of expression are classified into several interesting patterns of differences between two conditions. The package also includes functions for simulating data with these patterns from negative binomial distributions.

About

Summary

Mixture modeling of single-cell RNA-seq data to identify genes with differential distributions

Last Updated

Dec 23, 2024 at 12:28

License

GPL-2

Total Downloads

25.2K

Supported Platforms

noarch