bioconda / packages / bioconductor-scdd 1.12.0

Mixture modeling of single-cell RNA-seq data to identify genes with differential distributions

Installers

Info: This package contains files in non-standard labels.

conda install

  • noarch  v1.12.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-scdd
conda install -c bioconda/label/gcc7 bioconductor-scdd

Description

This package implements a method to analyze single-cell RNA- seq Data utilizing flexible Dirichlet Process mixture models. Genes with differential distributions of expression are classified into several interesting patterns of differences between two conditions. The package also includes functions for simulating data with these patterns from negative binomial distributions.

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