bioconda / packages / bioconductor-sbgnview 1.8.0

"SBGNview: Data Analysis, Integration and Visualization on SBGN Pathways"

Installers

conda install

  • noarch  v1.8.0
To install this package with conda run:
conda install -c bioconda bioconductor-sbgnview

Description

SBGNview is a tool set for pathway based data visalization, integration and analysis. SBGNview is similar and complementary to the widely used Pathview, with the following key features: 1. Pathway definition by the widely adopted Systems Biology Graphical Notation (SBGN); 2. Supports multiple major pathway databases beyond KEGG (Reactome, MetaCyc, SMPDB, PANTHER, METACROP) and user defined pathways; 3. Covers 5,200 reference pathways and over 3,000 species by default; 4. Extensive graphics controls, including glyph and edge attributes, graph layout and sub-pathway highlight; 5. SBGN pathway data manipulation, processing, extraction and analysis.


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