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bioconductor-sangeranalyser

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sangeranalyseR: a suite of functions for the analysis of Sanger sequence data in R

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-sangeranalyser

Usage Tracking

1.20.0
1.16.0
1.12.0
1.10.0
1.8.0
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Downloads (Last 6 months): 0

Description

This package builds on sangerseqR to allow users to create contigs from collections of Sanger sequencing reads. It provides a wide range of options for a number of commonly-performed actions including read trimming, detecting secondary peaks, and detecting indels using a reference sequence. All parameters can be adjusted interactively either in R or in the associated Shiny applications. There is extensive online documentation, and the package can outputs detailed HTML reports, including chromatograms.

About

Summary

sangeranalyseR: a suite of functions for the analysis of Sanger sequence data in R

Last Updated

Mar 1, 2026 at 01:25

License

GPL-2

Total Downloads

12.0K

Version Downloads

31

Supported Platforms

noarch