bioconductor-samexplorer
samExploreR package high-performance read summarisation to count vectors with avaliability of sequencing depth reduction simulation
samExploreR package high-performance read summarisation to count vectors with avaliability of sequencing depth reduction simulation
To install this package, run one of the following:
This R package is designed for subsampling procedure to simulate sequencing experiments with reduced sequencing depth. This package can be used to anlayze data generated from all major sequencing platforms such as Illumina GA, HiSeq, MiSeq, Roche GS-FLX, ABI SOLiD and LifeTech Ion PGM Proton sequencers. It supports multiple operating systems incluidng Linux, Mac OS X, FreeBSD and Solaris. Was developed with usage of Rsubread.
Summary
samExploreR package high-performance read summarisation to count vectors with avaliability of sequencing depth reduction simulation
Last Updated
Nov 1, 2020 at 13:24
License
GPL-3
Total Downloads
17.4K
Supported Platforms