bioconda / packages / bioconductor-rtn 2.18.0

RTN: Reconstruction of Transcriptional regulatory Networks and analysis of regulons

Installers

Info: This package contains files in non-standard labels.

conda install

  • noarch  v2.18.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-rtn
conda install -c bioconda/label/gcc7 bioconductor-rtn

Description

A transcriptional regulatory network (TRN) consists of a collection of transcription factors (TFs) and the regulated target genes. TFs are regulators that recognize specific DNA sequences and guide the expression of the genome, either activating or repressing the expression the target genes. The set of genes controlled by the same TF forms a regulon. This package provides classes and methods for the reconstruction of TRNs and analysis of regulons.


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