bioconda / packages / bioconductor-ripseeker 1.26.0

RIPSeeker: a statistical package for identifying protein-associated transcripts from RIP-seq experiments

Installers

Info: This package contains files in non-standard labels.

conda install

  • linux-64  v1.20.0
  • osx-64  v1.20.0
  • noarch  v1.26.0
To install this package run one of the following:
conda install -c bioconda bioconductor-ripseeker
conda install -c "bioconda/label/gcc7" bioconductor-ripseeker
conda install -c "bioconda/label/cf201901" bioconductor-ripseeker

Description

Infer and discriminate RIP peaks from RIP-seq alignments using two-state HMM with negative binomial emission probability. While RIPSeeker is specifically tailored for RIP-seq data analysis, it also provides a suite of bioinformatics tools integrated within this self-contained software package comprehensively addressing issues ranging from post-alignments processing to visualization and annotation.


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