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bioconda / packages / bioconductor-rgntx 1.4.0

Colocalization analysis of transcriptome elements in the presence of isoform heterogeneity and ambiguity

Installers

  • noarch v1.4.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-rgntx

Description

RgnTX allows the integration of transcriptome annotations so as to model the complex alternative splicing patterns. It supports the testing of transcriptome elements without clear isoform association, which is often the real scenario due to technical limitations. It involves functions that do permutaion test for evaluating association between features and transcriptome regions.


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