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bioconductor-reactomegsa

Community

Client for the Reactome Analysis Service for comparative multi-omics gene set analysis

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-reactomegsa

Usage Tracking

1.20.0
1.16.1
1.14.0
1.12.0
1.8.0
5 / 8 versions selected
Total downloads: 0

Description

The ReactomeGSA packages uses Reactome's online analysis service to perform a multi-omics gene set analysis. The main advantage of this package is, that the retrieved results can be visualized using REACTOME's powerful webapplication. Since Reactome's analysis service also uses R to perfrom the actual gene set analysis you will get similar results when using the same packages (such as limma and edgeR) locally. Therefore, if you only require a gene set analysis, different packages are more suited.

About

Summary

Client for the Reactome Analysis Service for comparative multi-omics gene set analysis

Information Last Updated

Apr 22, 2025 at 15:29

License

MIT + file LICENSE

Total Downloads

18.9K

Platforms

noarch Version: 1.20.0