bioconductor-rcm
Fit row-column association models with the negative binomial distribution for the microbiome
Fit row-column association models with the negative binomial distribution for the microbiome
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Combine ideas of log-linear analysis of contingency table, flexible response function estimation and empirical Bayes dispersion estimation for explorative visualization of microbiome datasets. The package includes unconstrained as well as constrained analysis. In addition, diagnostic plot to detect lack of fit are available.
Summary
Fit row-column association models with the negative binomial distribution for the microbiome
Last Updated
Feb 28, 2026 at 17:36
License
GPL-2
Total Downloads
22.3K
Version Downloads
24
Supported Platforms