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bioconda / packages / bioconductor-rcistarget.hg19.motifdbs.cisbponly.500bp 1.22.0

RcisTarget motif databases for human (hg19) - Subset of 4.6k motifs

Installers

Info: This package contains files in non-standard labels.
  • noarch v1.22.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-rcistarget.hg19.motifdbs.cisbponly.500bp
conda install bioconda/label/gcc7::bioconductor-rcistarget.hg19.motifdbs.cisbponly.500bp

Description

RcisTarget databases: Gene-based motif rankings and annotation to transcription factors. This package contains a subset of 4.6k motifs (cisbp motifs), scored only within 500bp upstream and the TSS. See RcisTarget tutorial to download the full databases, containing 20k motifs and search space up to 10kbp around the TSS.

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