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bioconductor-raids

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Accurate Inference of Genetic Ancestry from Cancer Sequences

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-raids

Usage Tracking

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Description

This package implements specialized algorithms that enable genetic ancestry inference from various cancer sequences sources (RNA, Exome and Whole-Genome sequences). This package also implements a simulation algorithm that generates synthetic cancer-derived data. This code and analysis pipeline was designed and developed for the following publication: Belleau, P et al. Genetic Ancestry Inference from Cancer-Derived Molecular Data across Genomic and Transcriptomic Platforms. Cancer Res 1 January 2023; 83 (1): 49–58.

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Summary

Accurate Inference of Genetic Ancestry from Cancer Sequences

Last Updated

Dec 31, 2024 at 17:57

License

Apache License (>= 2)

Total Downloads

1.1K

Supported Platforms

noarch