bioconda / packages / bioconductor-qsea 1.14.0

IP-seq data analysis and vizualization

Installers

Info: This package contains files in non-standard labels.

conda install

  • linux-64  v1.14.0
  • osx-64  v1.14.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-qsea
conda install -c bioconda/label/gcc7 bioconductor-qsea
conda install -c bioconda/label/cf201901 bioconductor-qsea

Description

qsea (quantitative sequencing enrichment analysis) was developed as the successor of the MEDIPS package for analyzing data derived from methylated DNA immunoprecipitation (MeDIP) experiments followed by sequencing (MeDIP-seq). However, qsea provides several functionalities for the analysis of other kinds of quantitative sequencing data (e.g. ChIP-seq, MBD-seq, CMS-seq and others) including calculation of differential enrichment between groups of samples.

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