bioconductor-podkat
Position-Dependent Kernel Association Test
Position-Dependent Kernel Association Test
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This package provides an association test that is capable of dealing with very rare and even private variants. This is accomplished by a kernel-based approach that takes the positions of the variants into account. The test can be used for pre-processed matrix data, but also directly for variant data stored in VCF files. Association testing can be performed whole-genome, whole-exome, or restricted to pre-defined regions of interest. The test is complemented by tools for analyzing and visualizing the results.
Summary
Position-Dependent Kernel Association Test
Last Updated
Mar 1, 2026 at 17:32
License
GPL (>= 2)
Total Downloads
52.2K
Version Downloads
317
Supported Platforms