bioconductor-podkat
Position-Dependent Kernel Association Test
Position-Dependent Kernel Association Test
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This package provides an association test that is capable of dealing with very rare and even private variants. This is accomplished by a kernel-based approach that takes the positions of the variants into account. The test can be used for pre-processed matrix data, but also directly for variant data stored in VCF files. Association testing can be performed whole-genome, whole-exome, or restricted to pre-defined regions of interest. The test is complemented by tools for analyzing and visualizing the results.
Summary
Position-Dependent Kernel Association Test
Last Updated
Dec 22, 2024 at 12:52
License
GPL (>= 2)
Total Downloads
50.6K
Supported Platforms
Unsupported Platforms