CMD + K

bioconductor-periodicdna

Community

Set of tools to identify periodic occurrences of k-mers in DNA sequences

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-periodicdna

Usage Tracking

1.20.0
1.16.0
1.12.0
1.10.0
1.8.0
5 / 8 versions selected
Downloads (Last 6 months): 0

Description

This R package helps the user identify k-mers (e.g. di- or tri-nucleotides) present periodically in a set of genomic loci (typically regulatory elements). The functions of this package provide a straightforward approach to find periodic occurrences of k-mers in DNA sequences, such as regulatory elements. It is not aimed at identifying motifs separated by a conserved distance; for this type of analysis, please visit MEME website.

About

Summary

Set of tools to identify periodic occurrences of k-mers in DNA sequences

Last Updated

Mar 2, 2026 at 20:34

License

GPL-3 + file LICENSE

Total Downloads

10.9K

Version Downloads

27

Supported Platforms

noarch