bioconda / packages / bioconductor-padma 1.4.0

Individualized Multi-Omic Pathway Deviation Scores Using Multiple Factor Analysis


conda install

  • noarch  v1.4.0
To install this package with conda run:
conda install -c bioconda bioconductor-padma


Use multiple factor analysis to calculate individualized pathway-centric scores of deviation with respect to the sampled population based on multi-omic assays (e.g., RNA-seq, copy number alterations, methylation, etc). Graphical and numerical outputs are provided to identify highly aberrant individuals for a particular pathway of interest, as well as the gene and omics drivers of aberrant multi-omic profiles.

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