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bioconda / packages / bioconductor-padma 1.12.0

Individualized Multi-Omic Pathway Deviation Scores Using Multiple Factor Analysis

Installers

  • noarch v1.12.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-padma

Description

Use multiple factor analysis to calculate individualized pathway-centric scores of deviation with respect to the sampled population based on multi-omic assays (e.g., RNA-seq, copy number alterations, methylation, etc). Graphical and numerical outputs are provided to identify highly aberrant individuals for a particular pathway of interest, as well as the gene and omics drivers of aberrant multi-omic profiles.


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