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bioconda / packages / bioconductor-oveseg 1.18.0

OVESEG-test to detect tissue/cell-specific markers

Installers

  • osx-64 v1.18.0
  • linux-64 v1.18.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-oveseg

Description

An R package for multiple-group comparison to detect tissue/cell-specific marker genes among subtypes. It provides functions to compute OVESEG-test statistics, derive component weights in the mixture null distribution model and estimate p-values from weightedly aggregated permutations. Obtained posterior probabilities of component null hypotheses can also portrait all kinds of upregulation patterns among subtypes.


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