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bioconductor-ompbam

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C++ Library for OpenMP-based multi-threaded sequential profiling of Binary Alignment Map (BAM) files

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-ompbam

Usage Tracking

1.10.0
1.6.0
1.4.0
1.2.0
4 / 8 versions selected
Total downloads: 0

Description

This packages provides C++ header files for developers wishing to create R packages that processes BAM files. ompBAM automates file access, memory management, and handling of multiple threads 'behind the scenes', so developers can focus on creating domain-specific functionality. The included vignette contains detailed documentation of this API, including quick-start instructions to create a new ompBAM-based package, and step-by-step explanation of the functionality behind the example packaged included within ompBAM.

About

Summary

C++ Library for OpenMP-based multi-threaded sequential profiling of Binary Alignment Map (BAM) files

Information Last Updated

Apr 22, 2025 at 15:29

License

MIT + file LICENSE

Total Downloads

5.5K

Platforms

Linux 64 Version: 1.10.0
macOS 64 Version: 1.10.0