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bioconductor-nipalsmcia

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Multiple Co-Inertia Analysis via the NIPALS Method

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-nipalsmcia

Usage Tracking

1.4.0
1.0.0
2 / 8 versions selected
Total downloads: 0

Description

Computes Multiple Co-Inertia Analysis (MCIA), a dimensionality reduction (jDR) algorithm, for a multi-block dataset using a modification to the Nonlinear Iterative Partial Least Squares method (NIPALS) proposed in (Hanafi et. al, 2010). Allows multiple options for row- and table-level preprocessing, and speeds up computation of variance explained. Vignettes detail application to bulk- and single cell- multi-omics studies.

About

Summary

Multiple Co-Inertia Analysis via the NIPALS Method

Information Last Updated

Apr 22, 2025 at 15:29

License

GPL-3

Total Downloads

1.3K

Platforms

noarch Version: 1.4.0